C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | NIN1/RPN12 binding protein 1 homolog (S. cerevisiae) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000169311  |
Nob1-002 |
ENSMUSG00000003848 |
10090 | - |
8:107412486-107425041  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008KB | CIL_0008KB_0002 | VISTA | 8:107038845-107639359 |
| CIL_00090U | CIL_00090U_0002 | VISTA | 8:107303123-107903792 |
| CIL_0004I2 | CIL_0004I2_0002 | CGP | 8:107388225-107425051 |
| CIL_0001NB | CIL_0001NB_0002 | CGP | 8:107412486-107558594 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003674 | ND | molecular_function |
| GO:0005634 | ISA | nucleus |
| GO:0005730 | ISA | nucleolus |
| GO:0005737 | ISA | cytoplasm |
| GO:0007601 | IMP | visual perception |
| GO:0030490 | ISA | maturation of SSU-rRNA |
| GO:0042274 | ISA | ribosomal small subunit biogenesis |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000268802
|
NOB1-001 | protein_coding | Homo_sapiens | 0 | 501 |
|
ENST00000502915
|
RP11-173E2.1-001 | processed_pseudogene | Homo_sapiens | 0 | 479 |
|
ENST00000564620
|
NOB1-006 | nonsense_mediated_decay | Homo_sapiens | 2e-23 | 113 |
|
ENST00000569871
|
NOB1-003 | nonsense_mediated_decay | Homo_sapiens | 4.00001e-41 | 172 |
