C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pogo transposable element with KRAB domain
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000169324 Pogk-203 ENSMUSG00000040596 10090 - 1:166393614-166409828 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaENSMUST00000169324
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta
ENSMUST00000169324 1.840±0.00 3.342±0.32 1.698±0.00 6.350±3.37 4.920±2.22 1.068±0.13 1.586±0.00 0.991±0.25 1.511±0.00 0.777±0.30 3.549±0.99 0.786±0.34

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007275 IEA multicellular organismal development
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000367875 POGK-003 protein_coding Homo_sapiens 0 2089
ENST00000367876 POGK-001 protein_coding Homo_sapiens 0 2134
ENST00000449930 POGK-002 protein_coding Homo_sapiens 0 682

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