C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lymphocyte cytosolic protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000169878 Lcp2-201 ENSMUSG00000002699 10090 + 11:34047201-34092280 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000169878
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000169878 1.333±0.44 0.363±0.15 1.000±0.00 0.294±0.09 3.813±1.96 0.492±0.12 0.230±0.11 0.406±0.20 2.455±1.73 1.768±0.32 0.166±0.22 0.863±0.67 0.408±0.06 0.673±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004OK CIL_0004OK_0002 CGP 11:34046920-34208089

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005829 TAS cytosol
GO:0005911 IDA cell-cell junction
GO:0045576 IMP mast cell activation
GO:0050663 IMP cytokine secretion

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000046794 LCP2-001 protein_coding Homo_sapiens 0 1592
ENST00000520322 LCP2-006 retained_intron Homo_sapiens 0 335
ENST00000520344 LCP2-011 protein_coding Homo_sapiens 0 239
ENST00000521416 LCP2-005 protein_coding Homo_sapiens 0 909

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