C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000046794 LCP2-001 ENSG00000043462 9606 - 5:170246237-170298227 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaENST00000046794
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta
ENST00000046794 2.407±0.00 3.295±0.00 0.201±0.00 0.392±0.26 1.014±0.10 0.205±0.00 0.404±0.00 0.448±0.00 0.371±0.03 0.113±0.00 0.558±0.06 1.877±0.66

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005829 TAS cytosol
GO:0005911 IEA cell-cell junction
GO:0006955 TAS immune response
GO:0007169 TAS transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007596 TAS blood coagulation
GO:0030168 TAS platelet activation
GO:0038095 TAS Fc-epsilon receptor signaling pathway
GO:0045087 TAS innate immune response
GO:0045576 IEA mast cell activation
GO:0050663 IEA cytokine secretion
GO:0050852 TAS T cell receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000052413 Lcp2-001 protein_coding Mus_musculus 0 1773
ENSMUST00000169878 Lcp2-201 protein_coding Mus_musculus 0 1592
ENSMUST00000109329 Lcp2-002 protein_coding Mus_musculus 0 1463
ENSMUST00000146318 Lcp2-004 processed_transcript Mus_musculus 0 496

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