C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cilia and flagella associated protein 54
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000170065 4930485B16Rik-005 ENSMUSG00000020014 10090 - 10:92972585-93034821 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartKidneyLiverOvaryENSMUST00000170065
Transcript ID Breast Heart Kidney Liver Ovary
ENSMUST00000170065 0.067±0.00 0.104±0.00 0.069±0.01 0.021±0.00 0.711±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007UU CIL_0007UU_0002 VISTA 10:92255726-92857808

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000524981 C12orf55-003 protein_coding Homo_sapiens 0 1227
ENST00000550977 C12orf55-004 protein_coding Homo_sapiens 0 344
ENST00000554108 C12orf55-008 processed_transcript Homo_sapiens 0 1520
ENST00000556591 C12orf55-007 processed_transcript Homo_sapiens 6e-19 99

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