C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 25, member 40
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000170496 Slc25a40-202 ENSMUSG00000054099 10090 + 5:8422988-8454790 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000170496
Transcript ID Bladder Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000170496 0.658±0.00 0.685±0.00 0.363±0.00 0.460±0.27 0.604±0.00 0.509±0.25 1.278±0.26 2.166±1.32 0.822±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005739 IDA mitochondrion
GO:0005743 IEA mitochondrial inner membrane
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000341119 SLC25A40-001 protein_coding Homo_sapiens 0 1227
ENST00000429674 SLC25A40-004 nonsense_mediated_decay Homo_sapiens 0 623
ENST00000446236 SLC25A40-008 nonsense_mediated_decay Homo_sapiens 0 348
ENST00000470328 SLC25A40-006 retained_intron Homo_sapiens 8e-18 95
ENST00000496348 SLC25A40-009 retained_intron Homo_sapiens 0 348

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