C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 25, member 40
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000341119 SLC25A40-001 ENSG00000075303 9606 - 7:87833568-87876349 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000341119
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000341119 1.246±0.00 1.926±0.00 3.100±2.29 1.626±0.00 1.086±0.06 1.246±0.33 2.515±1.65 0.732±0.20 1.371±0.00 0.514±0.00 2.296±0.86 0.770±0.17 2.419±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00052G CIL_00052G_0002 CGP 7:87627548-87876357
CIL_0004SW CIL_0004SW_0002 CGP 7:87833568-87909541

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 IEA mitochondrion
GO:0005743 IEA mitochondrial inner membrane
GO:0016021 IEA integral component of membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000066921 Slc25a40-201 protein_coding Mus_musculus 0 1227
ENSMUST00000170496 Slc25a40-202 protein_coding Mus_musculus 0 1227
ENSMUST00000188479 RP23-118M23.7-001 processed_pseudogene Mus_musculus 0 763

Loading