C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein kinase domain containing, cytoplasmic
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000170794 Pkdcc-001 ENSMUSG00000024247 10090 + 17:83215292-83225070 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000170794
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000170794 29.554±17.42 93.321±17.65 24.253±4.57 12.031±9.30 13.142±6.18 42.537±6.38 13.870±3.06 9.824±2.14 10.482±3.48 8.124±0.45 48.702±3.86 74.719±29.88 9.103±4.74 6.783±0.90

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00029H CIL_00029H_0002 CGP 17:83215292-83480361

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001501 IMP skeletal system development
GO:0004672 IDA protein kinase activity
GO:0004715 IDA non-membrane spanning protein tyrosine kinase activity
GO:0005524 IEA ATP binding
GO:0005576 IDA extracellular region
GO:0005794 IDA Golgi apparatus
GO:0015031 IEA protein transport
GO:0018108 IDA peptidyl-tyrosine phosphorylation
GO:0030154 IEA cell differentiation
GO:0030282 IMP bone mineralization
GO:0030501 IMP positive regulation of bone mineralization
GO:0032332 IMP positive regulation of chondrocyte differentiation
GO:0035264 IMP multicellular organism growth
GO:0042997 IDA negative regulation of Golgi to plasma membrane protein transport
GO:0048286 IMP lung alveolus development
GO:0048566 IMP embryonic digestive tract development
GO:0060021 IMP palate development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000294964 PKDCC-001 protein_coding Homo_sapiens 0 2193
ENST00000401498 PKDCC-003 nonsense_mediated_decay Homo_sapiens 0 1506
ENST00000470578 PKDCC-007 retained_intron Homo_sapiens 0 483
ENST00000475241 PKDCC-011 retained_intron Homo_sapiens 0 329
ENST00000480099 PKDCC-008 processed_transcript Homo_sapiens 0 361
ENST00000485578 PKDCC-005 retained_intron Homo_sapiens 0 558
ENST00000490302 PKDCC-004 retained_intron Homo_sapiens 0 436
ENST00000492861 PKDCC-002 retained_intron Homo_sapiens 0 616

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