C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ecotropic viral integration site 2a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000170799 Evi2a-201 ENSMUSG00000078771 10090 - 11:79526568-79530609 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonKidneyMuscleOvaryPlacentaTestisENSMUST00000170799
Transcript ID Adipose Adrenal Brain Colon Kidney Muscle Ovary Placenta Testis
ENSMUST00000170799 2.228±0.00 0.781±0.00 0.310±0.06 0.661±0.03 0.453±0.08 0.159±0.00 1.290±0.39 0.150±0.02 0.405±0.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004GN CIL_0004GN_0003 CGP 11:79339693-79581612
CIL_0005JJ CIL_0005JJ_0002 CGP 11:79500982-79530589
CIL_0005JK CIL_0005JK_0002 CGP 11:79515056-79530609
CIL_0000VQ CIL_0000VQ_0002 CGP 11:79526560-79698023

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000247270 EVI2A-002 protein_coding Homo_sapiens 0 344
ENST00000461237 EVI2A-003 protein_coding Homo_sapiens 0 344
ENST00000462804 EVI2A-001 protein_coding Homo_sapiens 0 344
ENST00000578021 CTD-2370N5.3-003 nonsense_mediated_decay Homo_sapiens 0 309
ENST00000578584 CTD-2370N5.3-001 protein_coding Homo_sapiens 0 335
ENST00000581884 CTD-2370N5.3-004 nonsense_mediated_decay Homo_sapiens 0 307
ENST00000584948 CTD-2370N5.3-002 protein_coding Homo_sapiens 0 309

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