C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: exonuclease 3'-5' domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000171024 Exd1-201 ENSMUSG00000048647 10090 - 2:119516511-119541513 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000171024
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000171024 0.664±0.31 0.244±0.14 0.591±0.00 0.085±0.03 0.815±0.19 0.287±0.15 0.109±0.03 0.178±0.01 0.273±0.24 0.207±0.07 0.212±0.11 0.285±0.16 0.203±0.06 0.621±0.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000798 CIL_000798_0002 CGP 2:119373042-119547627
CIL_0005ZB CIL_0005ZB_0002 CGP 2:119516505-119587027

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0008408 IEA 3'-5' exonuclease activity
GO:0090305 IEA nucleic acid phosphodiester bond hydrolysis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000314992 EXD1-001 protein_coding Homo_sapiens 0 968
ENST00000458580 EXD1-002 protein_coding Homo_sapiens 0 1149
ENST00000595191 MYO1F-005 retained_intron Homo_sapiens 0.0000000000009 79

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