C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane 4 superfamily member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000171384 Tm4sf1-202 ENSMUSG00000027800 10090 - 3:57285611-57294889 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000171384
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000171384 6.275±0.58 5.629±1.75 4.117±0.47 0.214±0.04 7.861±0.94 2.320±0.49 6.342±0.88 7.227±1.42 0.611±0.25 25.563±1.35 1.524±0.34 4.382±2.06 0.617±0.21 0.171±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002R2 CIL_0002R2_0002 CGP 3:57285611-57441677

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005887 IEA integral component of plasma membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000305366 TM4SF1-001 protein_coding Homo_sapiens 0 588
ENST00000472441 TM4SF1-003 protein_coding Homo_sapiens 0 318
ENST00000493298 TM4SF1-005 nonsense_mediated_decay Homo_sapiens 0 209
ENST00000622124 TM4SF1-201 protein_coding Homo_sapiens 0 580

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