C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: histone cluster 2, H4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000171473 Hist2h4-001 ENSMUSG00000091405 10090 - 3:96261682-96263311 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000171473
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000171473 2.233±1.26 2.366±0.29 0.555±0.03 2.880±1.77 4.665±3.18 5.962±0.93 0.664±0.21 1.541±0.79 10.544±17.12 4.129±0.29 0.185±0.11 4.312±2.02 1.146±1.18 0.296±0.09

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000786 ISS nucleosome
GO:0003677 ISS DNA binding
GO:0005515 IPI protein binding
GO:0005654 TAS nucleoplasm
GO:0006334 ISS nucleosome assembly
GO:0046982 IEA protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000112196 HIST1H4K-001 protein_coding Danio_rerio 0 281
ENST00000355057 HIST1H4J-001 protein_coding Homo_sapiens 0 355
ENST00000578186 HIST2H4A-004 protein_coding Homo_sapiens 0 392
ENST00000579512 HIST2H4B-004 protein_coding Homo_sapiens 0 392
ENST00000611927 HIST1H4K-001 protein_coding Homo_sapiens 0 353
ENST00000612061 HIST2H4B-002 nonsense_mediated_decay Homo_sapiens 0 392
ENST00000613412 HIST2H4A-002 nonsense_mediated_decay Homo_sapiens 0 392
ENST00000614272 HIST2H4A-003 nonsense_mediated_decay Homo_sapiens 0 392
ENST00000618193 HIST2H4A-001 nonsense_mediated_decay Homo_sapiens 0 392
ENST00000621520 HIST2H4B-003 nonsense_mediated_decay Homo_sapiens 0 392

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