C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: histone cluster 1, H4j
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000355057 HIST1H4J-001 ENSG00000197238 9606 + 6:27824108-27824480 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000355057
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000355057 0.224±0.00 0.609±0.00 2.529±2.05 6.017±5.46 9.408±9.15 2.668±0.00 8.449±0.00 2.685±2.31 0.475±0.00 5.552±6.33 1.276±1.02 1.194±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000228 IDA nuclear chromosome
GO:0000278 TAS mitotic cell cycle
GO:0000723 TAS telomere maintenance
GO:0000786 TAS:IEA nucleosome
GO:0003677 TAS:IEA DNA binding
GO:0005515 IPI protein binding
GO:0005576 TAS extracellular region
GO:0005634 IDA:IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0006325 TAS chromatin organization
GO:0006334 TAS nucleosome assembly
GO:0006335 IDA DNA replication-dependent nucleosome assembly
GO:0006336 IDA DNA replication-independent nucleosome assembly
GO:0006352 IEA DNA-templated transcription, initiation
GO:0016020 IDA membrane
GO:0034080 TAS CENP-A containing nucleosome assembly
GO:0035574 TAS histone H4-K20 demethylation
GO:0035575 TAS histone demethylase activity (H4-K20 specific)
GO:0043234 IDA protein complex
GO:0044822 IDA poly(A) RNA binding
GO:0045653 IDA negative regulation of megakaryocyte differentiation
GO:0046982 IEA protein heterodimerization activity
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102972 Hist1h4h-001 protein_coding Mus_musculus 0 425
ENSMUST00000104941 Hist1h4m-001 protein_coding Mus_musculus 0 412
ENSMUST00000102965 Hist1h4b-001 protein_coding Mus_musculus 0 412
ENSMUST00000102971 Hist1h4f-001 protein_coding Mus_musculus 0 409
ENSMUST00000087714 Hist1h4j-001 protein_coding Mus_musculus 0 409
ENSMUST00000102979 Hist1h4n-001 protein_coding Mus_musculus 0 407
ENSMUST00000102968 Hist1h4d-001 protein_coding Mus_musculus 0 405
ENSMUST00000102977 Hist1h4i-001 protein_coding Mus_musculus 0 405
ENSMUST00000102964 Hist1h4a-001 protein_coding Mus_musculus 0 405
ENSMUST00000102983 Hist1h4k-001 protein_coding Mus_musculus 0 398
ENSMUST00000102967 Hist1h4c-001 protein_coding Mus_musculus 0 388
ENSMUST00000171473 Hist2h4-001 protein_coding Mus_musculus 0 355
ENSDART00000126439 protein_coding Danio_rerio 0 320
ENSDART00000112685 si:ch211-113a14.10-201 protein_coding Danio_rerio 0 298
ENSDART00000128059 protein_coding Danio_rerio 0 291

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