C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 26, member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000171616 Slc26a3-006 ENSMUSG00000001225 10090 + 12:31438217-31473495 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastHeartOvaryPlacentaENSMUST00000171616
Transcript ID Brain Breast Heart Ovary Placenta
ENSMUST00000171616 0.032±0.00 0.018±0.00 0.194±0.00 0.137±0.00 0.010±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008ZV CIL_0008ZV_0002 VISTA 12:31009963-31611477
CIL_0001G3 CIL_0001G3_0002 CGP 12:31390871-31499616

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005887 ISS integral component of plasma membrane
GO:0006820 IDA anion transport
GO:0015301 IDA anion:anion antiporter activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000340010 SLC26A3-002 protein_coding Homo_sapiens 0 1186
ENST00000379083 SLC26A3-001 nonsense_mediated_decay Homo_sapiens 0 1498

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