C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: dishevelled 3, dsh homolog (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000171774 Dvl3-004 ENSMUSG00000003233 10090 + 16:20517106-20531646 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000171774
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000171774 15.503±0.00 22.472±0.00 30.274±3.11 0.900±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005G3 CIL_0005G3_0002 CGP 16:20498817-20532520
CIL_0003YF CIL_0003YF_0003 CGP 16:20516982-20544909

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003007 IGI heart morphogenesis
GO:0003148 IMP outflow tract septum morphogenesis
GO:0005109 IBA frizzled binding
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005938 IBA cell cortex
GO:0008013 IBA beta-catenin binding
GO:0023051 IBA regulation of signaling
GO:0035556 IEA intracellular signal transduction
GO:0045893 IBA positive regulation of transcription, DNA-templated
GO:0060026 IBA convergent extension
GO:0060070 IBA canonical Wnt signaling pathway
GO:0060071 IGI Wnt signaling pathway, planar cell polarity pathway
GO:0090103 IGI cochlea morphogenesis
GO:0090179 IGI planar cell polarity pathway involved in neural tube closure

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000005340 DVL2-001 protein_coding Homo_sapiens 0 431
ENST00000313143 DVL3-001 protein_coding Homo_sapiens 0 1445
ENST00000378888 DVL1-004 protein_coding Homo_sapiens 0 453
ENST00000378891 DVL1-001 protein_coding Homo_sapiens 0 453
ENST00000423300 DVL3-005 protein_coding Homo_sapiens 0 1027
ENST00000431765 DVL3-002 protein_coding Homo_sapiens 0 2872
ENST00000435708 DVL3-006 nonsense_mediated_decay Homo_sapiens 0 305
ENST00000462665 DVL3-007 processed_transcript Homo_sapiens 0 726
ENST00000467873 DVL3-009 retained_intron Homo_sapiens 0 241
ENST00000478247 DVL3-004 retained_intron Homo_sapiens 0 1437
ENST00000478639 DVL3-008 retained_intron Homo_sapiens 3e-18 95
ENST00000573354 DVL2-014 retained_intron Homo_sapiens 0 259
ENST00000574143 DVL2-010 protein_coding Homo_sapiens 0 431
ENST00000574591 DVL2-013 retained_intron Homo_sapiens 0 268
ENST00000574642 DVL2-007 processed_transcript Homo_sapiens 0 222
ENST00000575458 DVL2-004 protein_coding Homo_sapiens 0 431
ENST00000575756 DVL2-008 protein_coding Homo_sapiens 0 431
ENST00000577154 DVL2-012 retained_intron Homo_sapiens 0 241

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