C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: transforming growth factor beta 1 induced transcript 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000171888 Tgfb1i1-009 ENSMUSG00000030782 10090 + 7:128248018-128253711 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00035P CIL_00035P_0002 CGP 7:128237357-128253712
CIL_000708 CIL_000708_0002 CGP 7:128246812-128272430

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000361773 TGFB1I1-201 protein_coding Homo_sapiens 0 1214
ENST00000394858 TGFB1I1-002 protein_coding Homo_sapiens 0 1214
ENST00000394863 TGFB1I1-001 protein_coding Homo_sapiens 0 1214
ENST00000561785 TGFB1I1-017 retained_intron Homo_sapiens 0 209
ENST00000562165 TGFB1I1-018 retained_intron Homo_sapiens 0 396
ENST00000562566 TGFB1I1-015 protein_coding Homo_sapiens 0 381
ENST00000563712 TGFB1I1-007 nonsense_mediated_decay Homo_sapiens 0 1214
ENST00000564176 TGFB1I1-003 retained_intron Homo_sapiens 0 390
ENST00000564804 TGFB1I1-005 nonsense_mediated_decay Homo_sapiens 0 1140
ENST00000565360 TGFB1I1-020 protein_coding Homo_sapiens 0 390
ENST00000565454 TGFB1I1-012 protein_coding Homo_sapiens 0 368
ENST00000567066 TGFB1I1-006 nonsense_mediated_decay Homo_sapiens 0 1214
ENST00000567524 TGFB1I1-016 retained_intron Homo_sapiens 3e-26 122
ENST00000567607 TGFB1I1-004 protein_coding Homo_sapiens 0 1214
ENST00000568142 TGFB1I1-019 retained_intron Homo_sapiens 0 390
ENST00000569254 TGFB1I1-014 retained_intron Homo_sapiens 0 233
ENST00000569703 TGFB1I1-021 retained_intron Homo_sapiens 0 603

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