C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: fidgetin-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000171938 Fignl1-202 ENSMUSG00000035455 10090 - 11:11800288-11808962 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonHeartMuscleOvaryPlacentaTestisENSMUST00000171938
Transcript ID Bladder Brain Colon Heart Muscle Ovary Placenta Testis
ENSMUST00000171938 0.107±0.00 0.036±0.00 0.546±0.00 0.008±0.00 0.050±0.01 0.864±0.56 1.371±0.65 1.571±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008XP CIL_0008XP_0002 VISTA 11:11227967-11828770
CIL_0008P3 CIL_0008P3_0002 VISTA 11:11375621-11977027
CIL_0008XT CIL_0008XT_0002 VISTA 11:11399170-12000205
CIL_0007SD CIL_0007SD_0002 VISTA 11:11453227-12053958
CIL_00089U CIL_00089U_0002 VISTA 11:11536402-12137998
CIL_0008KL CIL_0008KL_0002 VISTA 11:11661856-12262621
CIL_000642 CIL_000642_0002 CGP 11:11685003-11808962
CIL_000641 CIL_000641_0002 CGP 11:11787431-11898144

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000228 ISS nuclear chromosome
GO:0000287 ISS magnesium ion binding
GO:0001649 IMP osteoblast differentiation
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0010569 ISS regulation of double-strand break repair via homologous recombination
GO:0016787 ISS hydrolase activity
GO:0033687 IMP osteoblast proliferation
GO:0043066 IMP negative regulation of apoptotic process
GO:0046034 ISS ATP metabolic process
GO:0051726 IMP regulation of cell cycle
GO:0070062 IEA extracellular vesicular exosome
GO:0071479 ISS cellular response to ionizing radiation
GO:2001243 IMP negative regulation of intrinsic apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000356889 FIGNL1-002 protein_coding Homo_sapiens 0 1847
ENST00000395556 FIGNL1-001 protein_coding Homo_sapiens 0 1847
ENST00000419119 FIGNL1-004 protein_coding Homo_sapiens 0 1847
ENST00000422854 FIGNL1-010 protein_coding Homo_sapiens 0 241
ENST00000433017 FIGNL1-003 protein_coding Homo_sapiens 0 1847
ENST00000436590 FIGNL1-006 protein_coding Homo_sapiens 0 337
ENST00000440350 FIGNL1-007 protein_coding Homo_sapiens 0 220
ENST00000611938 FIGNL1-201 protein_coding Homo_sapiens 0 1847
ENST00000613602 FIGNL1-202 protein_coding Homo_sapiens 0 1847
ENST00000615084 FIGNL1-203 protein_coding Homo_sapiens 0 1847
ENST00000617389 FIGNL1-204 protein_coding Homo_sapiens 0 1847

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