C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: gem (nuclear organelle) associated protein 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000172035 Gemin5-201 ENSMUSG00000037275 10090 - 11:58120002-58168539 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000172035
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000172035 1.797±0.81 1.262±0.41 2.195±0.81 3.616±1.49 1.185±0.46 0.998±0.29 0.292±0.04 1.107±0.16 1.563±1.39 0.810±0.28 0.918±0.38 2.550±0.82 2.125±0.84 2.744±0.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099I CIL_00099I_0002 VISTA 11:57547462-58147793
CIL_00088D CIL_00088D_0002 VISTA 11:57627590-58231336
CIL_00023V CIL_00023V_0002 CGP 11:58104153-58168539
CIL_00023Y CIL_00023Y_0002 CGP 11:58120002-58179565

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0005654 IEA nucleoplasm
GO:0005737 IEA cytoplasm
GO:0005829 IEA cytosol
GO:0016020 IEA membrane
GO:0016604 IEA nuclear body
GO:0017069 IEA snRNA binding
GO:0032797 IEA SMN complex
GO:0034719 IEA SMN-Sm protein complex
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000285873 GEMIN5-001 protein_coding Homo_sapiens 0 3687

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