C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: suppression of tumorigenicity 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000172107 St13-001 ENSMUSG00000022403 10090 - 15:81363669-81400043 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000172107
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000172107 14.439±5.06 7.042±1.14 10.089±0.64 12.732±0.30 5.758±3.39 4.038±0.67 2.573±0.34 10.737±3.25 9.043±3.82 6.053±0.21 7.525±1.82 12.256±6.52 26.723±14.59 16.745±1.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005WC CIL_0005WC_0002 CGP 15:81318921-81400077
CIL_00065J CIL_00065J_0002 CGP 15:81363669-81456807

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0005829 IEA cytosol
GO:0006457 IEA protein folding
GO:0019904 IEA protein domain specific binding
GO:0030544 IEA Hsp70 protein binding
GO:0032403 IEA protein complex binding
GO:0032564 IEA dATP binding
GO:0042802 IEA identical protein binding
GO:0043234 IEA protein complex
GO:0051082 IEA unfolded protein binding
GO:0051087 IEA chaperone binding
GO:0051260 IEA protein homooligomerization
GO:0061084 IEA negative regulation of protein refolding
GO:0070062 IEA extracellular vesicular exosome
GO:0070389 IEA chaperone cofactor-dependent protein refolding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000216218 ST13-001 protein_coding Homo_sapiens 0 1838
ENST00000393026 RP11-56H16.1-001 processed_pseudogene Homo_sapiens 0 1040
ENST00000411695 ST13-003 protein_coding Homo_sapiens 0 582
ENST00000413424 ST13-004 nonsense_mediated_decay Homo_sapiens 0 551
ENST00000417082 ST13P13-001 processed_pseudogene Homo_sapiens 0 1120
ENST00000421179 AC083873.4-001 processed_pseudogene Homo_sapiens 0 1297
ENST00000439405 ST13P11-001 processed_pseudogene Homo_sapiens 0 797
ENST00000442505 ST13P19-001 processed_pseudogene Homo_sapiens 0 1136
ENST00000447996 ST13P20-001 transcribed_processed_pseudogene Homo_sapiens 0 824
ENST00000455824 ST13-002 nonsense_mediated_decay Homo_sapiens 0 808
ENST00000456632 ST13P18-001 processed_pseudogene Homo_sapiens 0 1110
ENST00000460666 ST13P15-001 processed_pseudogene Homo_sapiens 0 1303
ENST00000468100 RP11-76H14.2-001 processed_pseudogene Homo_sapiens 0 342
ENST00000474095 ST13P14-001 processed_pseudogene Homo_sapiens 0 473
ENST00000480048 ST13-005 retained_intron Homo_sapiens 0 344
ENST00000495613 ST13P4-001 processed_pseudogene Homo_sapiens 0 1286
ENST00000495652 ST13-006 retained_intron Homo_sapiens 0 281
ENST00000508958 ST13P12-001 processed_pseudogene Homo_sapiens 0 987
ENST00000520729 RP4-701O16.5-001 processed_pseudogene Homo_sapiens 0 555
ENST00000522430 ST13P6-001 processed_pseudogene Homo_sapiens 0 1317
ENST00000526214 ST13P5-001 processed_pseudogene Homo_sapiens 0 1319
ENST00000526466 ST13P10-001 processed_pseudogene Homo_sapiens 0 922
ENST00000546640 ST13P3-001 processed_pseudogene Homo_sapiens 0 1314
ENST00000551532 RP11-58A17.2-001 processed_pseudogene Homo_sapiens 0 571
ENST00000573097 RP11-58A17.2-001 processed_pseudogene Homo_sapiens 0 571
ENST00000615506 ST13-201 protein_coding Homo_sapiens 0 1692
ENST00000620312 ST13-202 protein_coding Homo_sapiens 0 795

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