C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: septin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000172165 Sept2-202 ENSMUSG00000026276 10090 + 1:93478993-93509733 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000172165
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000172165 11.581±0.00 14.064±2.79 17.761±0.42 10.102±4.39 38.229±0.00 12.001±0.00 6.381±1.93 10.567±4.65 9.079±5.58 9.919±0.00 3.774±1.62 34.538±27.77 32.237±15.83 11.500±3.73

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002JH CIL_0002JH_0002 CGP 1:93405940-93510260
CIL_0002JL CIL_0002JL_0002 CGP 1:93478964-93621976

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002036 IDA regulation of L-glutamate transport
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005876 TAS spindle microtubule
GO:0005886 IDA plasma membrane
GO:0005938 TAS cell cortex
GO:0007049 IEA cell cycle
GO:0009986 IDA cell surface
GO:0015629 TAS actin cytoskeleton
GO:0015630 TAS microtubule cytoskeleton
GO:0030234 IDA enzyme regulator activity
GO:0030496 TAS midbody
GO:0031105 IEA septin complex
GO:0032880 IDA regulation of protein localization
GO:0032947 IDA protein complex scaffold
GO:0035869 IDA ciliary transition zone
GO:0042802 TAS identical protein binding
GO:0042995 IDA cell projection
GO:0045202 IDA synapse
GO:0050790 IDA regulation of catalytic activity
GO:0051258 TAS protein polymerization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000360051 SEPT2-001 protein_coding Homo_sapiens 0 1391
ENST00000366210 SEPT2-041 processed_transcript Homo_sapiens 0 401
ENST00000391971 SEPT2-007 protein_coding Homo_sapiens 0 1391
ENST00000391973 SEPT2-002 protein_coding Homo_sapiens 0 1391
ENST00000401990 SEPT2-004 protein_coding Homo_sapiens 0 1112
ENST00000402092 SEPT2-008 protein_coding Homo_sapiens 0 1391
ENST00000407017 SEPT2-014 protein_coding Homo_sapiens 0 399
ENST00000407971 SEPT2-005 protein_coding Homo_sapiens 0 1404
ENST00000411484 SEPT2-023 protein_coding Homo_sapiens 0 466
ENST00000420786 SEPT2-037 protein_coding Homo_sapiens 0 207
ENST00000421717 SEPT2-046 protein_coding Homo_sapiens 0 211
ENST00000425899 SEPT2-033 nonsense_mediated_decay Homo_sapiens 0 307
ENST00000428282 SEPT2-009 protein_coding Homo_sapiens 0 830
ENST00000428524 SEPT2-013 protein_coding Homo_sapiens 0 204
ENST00000434955 SEPT2-026 protein_coding Homo_sapiens 0 377
ENST00000436795 SEPT2-021 protein_coding Homo_sapiens 0 514
ENST00000437066 SEPT2-034 protein_coding Homo_sapiens 0 457
ENST00000441533 SEPT2-031 protein_coding Homo_sapiens 0 278
ENST00000443492 SEPT2-040 protein_coding Homo_sapiens 0 568
ENST00000445030 SEPT2-012 protein_coding Homo_sapiens 0 281
ENST00000449239 SEPT2-039 protein_coding Homo_sapiens 0 610
ENST00000457335 SEPT2-022 nonsense_mediated_decay Homo_sapiens 0 459
ENST00000467971 SEPT2-032 retained_intron Homo_sapiens 0 560
ENST00000469434 SEPT2-016 retained_intron Homo_sapiens 0 401
ENST00000473479 SEPT2-029 retained_intron Homo_sapiens 0 331
ENST00000475474 SEPT2-019 retained_intron Homo_sapiens 0 399
ENST00000482304 SEPT2-018 retained_intron Homo_sapiens 0 281
ENST00000616972 SEPT2-201 protein_coding Homo_sapiens 0 1391

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