C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cholinergic receptor, muscarinic 2, cardiac
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000172278 Chrm2-001 ENSMUSG00000045613 10090 + 6:36388084-36528414 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000172278
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000172278 0.013±0.01 0.050±0.02 2.211±0.31 1.165±0.46 0.097±0.05 2.972±0.97 16.362±2.58 0.034±0.02 0.099±0.08 4.140±0.47 0.010±0.00 0.040±0.02 0.060±0.05 0.037±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00023Q CIL_00023Q_0003 CGP 6:36388084-36811361

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005886 IEA plasma membrane
GO:0005887 ISS integral component of plasma membrane
GO:0007213 ISS G-protein coupled acetylcholine receptor signaling pathway
GO:0008016 IEA regulation of heart contraction
GO:0009615 IEA response to virus
GO:0016907 ISS G-protein coupled acetylcholine receptor activity
GO:0030054 IEA cell junction
GO:0045211 IEA postsynaptic membrane
GO:0051482 ISS positive regulation of cytosolic calcium ion concentration involved in phospholipase C-activating G-protein coupled signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000320658 CHRM2-007 protein_coding Homo_sapiens 0 1790
ENST00000401861 CHRM2-003 protein_coding Homo_sapiens 0 1881
ENST00000445907 CHRM2-001 protein_coding Homo_sapiens 0 2006
ENST00000453373 CHRM2-004 protein_coding Homo_sapiens 0 1851

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