C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | charged multivesicular body protein 1A | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000172336  |
Chmp1a-002 |
ENSMUSG00000000743 |
10090 | - |
8:123209587-123212763  |
retained_intron |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008HA | CIL_0008HA_0002 | VISTA | 8:122617544-123223043 |
| CIL_000334 | CIL_000334_0002 | CGP | 8:123186235-123212763 |
| CIL_000333 | CIL_000333_0002 | CGP | 8:123204264-123222045 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000397901
|
CHMP1A-001 | protein_coding | Homo_sapiens | 0.000003 | 58 |
|
ENST00000549328
|
CHMP1A-009 | nonsense_mediated_decay | Homo_sapiens | 0.000001 | 58 |
|
ENST00000550102
|
CHMP1A-011 | protein_coding | Homo_sapiens | 0.000001 | 58 |
|
ENST00000550872
|
CHMP1A-005 | retained_intron | Homo_sapiens | 0.0000007 | 58 |
|
ENST00000551981
|
CHMP1A-006 | retained_intron | Homo_sapiens | 0.0000009 | 58 |
