C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: charged multivesicular body protein 1A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000550102 CHMP1A-011 ENSG00000131165 9606 - 16:89645889-89657650 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryENST00000550102
Transcript ID Ovary
ENST00000550102 12.411±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000334 CIL_000334_0001 CGP 16:89613308-89657845
CIL_000333 CIL_000333_0001 CGP 16:89644431-89671272

Gene Ontology

GO IDEvidence TypeGO Description
GO:0007034 IEA vacuolar transport
GO:0015031 IEA protein transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000000759 Chmp1a-001 protein_coding Mus_musculus 0 634
ENSMUST00000167655 Chmp1a-003 retained_intron Mus_musculus 0 580
ENSMUST00000172336 Chmp1a-002 retained_intron Mus_musculus 0.000001 58

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