C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: fibronectin type III domain containing 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000172435 Fndc4-202 ENSMUSG00000038552 10090 - 5:31292255-31295877 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000172435
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000172435 4.837±2.64 3.552±0.80 2.967±0.51 27.227±4.65 2.329±0.23 1.156±0.40 0.880±0.16 0.972±0.17 4.713±3.59 2.063±0.33 0.286±0.10 9.145±3.79 4.269±1.99 0.264±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00010D CIL_00010D_0002 CGP 5:31253280-31295877
CIL_0001DA CIL_0001DA_0002 CGP 5:31292255-31327300

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005783 IDA endoplasmic reticulum
GO:0005886 IDA plasma membrane
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264703 FNDC4-001 protein_coding Homo_sapiens 0 1445
ENST00000476197 FNDC4-003 retained_intron Homo_sapiens 0 809
ENST00000491414 FNDC4-002 retained_intron Homo_sapiens 0 438

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