C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: allograft inflammatory factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000172693 Aif1-003 ENSMUSG00000024397 10090 - 17:35170991-35172819 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000172693
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000172693 1.668±0.74 0.511±0.00 5.578±0.02 0.653±0.11 2.613±0.69 1.231±0.30 0.712±0.13 1.423±0.51 4.858±3.42 0.799±0.14 0.765±0.52 1.350±0.73 1.413±0.78

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001726 IDA ruffle
GO:0001774 NAS microglial cell activation
GO:0001891 IDA phagocytic cup
GO:0005509 IDA calcium ion binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005829 ISS cytosol
GO:0005884 IDA actin filament
GO:0006911 IMP phagocytosis, engulfment
GO:0006954 ISS inflammatory response
GO:0016601 IMP Rac protein signal transduction
GO:0030027 IDA lamellipodium
GO:0030041 ISS actin filament polymerization
GO:0032587 IDA ruffle membrane
GO:0042102 ISS positive regulation of T cell proliferation
GO:0048661 ISS positive regulation of smooth muscle cell proliferation
GO:0051015 ISS actin filament binding
GO:0051017 ISS actin filament bundle assembly
GO:0071346 ISS cellular response to interferon-gamma
GO:0071673 ISS positive regulation of smooth muscle cell chemotaxis
GO:0090026 ISS positive regulation of monocyte chemotaxis
GO:0097178 IMP ruffle assembly
GO:1900087 ISS positive regulation of G1/S transition of mitotic cell cycle
GO:2000406 ISS positive regulation of T cell migration

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000337917 AIF1-004 protein_coding Homo_sapiens 0 525
ENST00000376059 AIF1-001 protein_coding Homo_sapiens 0 569
ENST00000383474 AIF1-001 protein_coding Homo_sapiens 0 569
ENST00000412407 AIF1-004 protein_coding Homo_sapiens 0 525
ENST00000413349 AIF1-001 protein_coding Homo_sapiens 0 569
ENST00000414149 AIF1-001 protein_coding Homo_sapiens 0 569
ENST00000417200 AIF1-004 protein_coding Homo_sapiens 0 525
ENST00000425748 AIF1-001 protein_coding Homo_sapiens 0 569
ENST00000437985 AIF1-004 protein_coding Homo_sapiens 0 525
ENST00000440907 AIF1-001 protein_coding Homo_sapiens 0 569
ENST00000454372 AIF1-004 protein_coding Homo_sapiens 0 525
ENST00000454573 AIF1-004 protein_coding Homo_sapiens 0 525
ENST00000459762 AIF1-006 retained_intron Homo_sapiens 0 230
ENST00000462008 AIF1-003 retained_intron Homo_sapiens 5.60519e-45 185
ENST00000466820 AIF1-006 retained_intron Homo_sapiens 0 230
ENST00000468277 AIF1-006 retained_intron Homo_sapiens 0 230
ENST00000469692 AIF1-003 retained_intron Homo_sapiens 5.60519e-45 185
ENST00000470803 AIF1-006 retained_intron Homo_sapiens 0 230
ENST00000486737 AIF1-003 retained_intron Homo_sapiens 5.60519e-45 185
ENST00000488491 AIF1-003 processed_transcript Homo_sapiens 5.60519e-45 185
ENST00000489150 AIF1-003 retained_intron Homo_sapiens 5.60519e-45 185
ENST00000489685 AIF1-006 retained_intron Homo_sapiens 0 230
ENST00000495860 AIF1-006 retained_intron Homo_sapiens 0 230
ENST00000497362 AIF1-003 retained_intron Homo_sapiens 5.60519e-45 185

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