C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: mutS homolog 2 (E. coli)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000172855 Msh2-005 ENSMUSG00000024151 10090 + 17:87672609-87685566 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastLungOvaryENSMUST00000172855
Transcript ID Adrenal Breast Lung Ovary
ENSMUST00000172855 10.286±1.97 6.340±0.00 5.861±0.00 6.498±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008D2 CIL_0008D2_0002 VISTA 17:87075116-87678515
CIL_0006KU CIL_0006KU_0002 CGP 17:87635979-87723713
CIL_0006KS CIL_0006KS_0002 CGP 17:87672330-87797994

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000233146 MSH2-001 protein_coding Homo_sapiens 0 337
ENST00000406134 MSH2-002 protein_coding Homo_sapiens 0 337
ENST00000543555 MSH2-201 protein_coding Homo_sapiens 0 337
ENST00000610696 MSH2-202 protein_coding Homo_sapiens 0 337
ENST00000613514 MSH2-203 protein_coding Homo_sapiens 0 337
ENST00000617333 MSH2-204 protein_coding Homo_sapiens 0 337
ENST00000617938 MSH2-205 protein_coding Homo_sapiens 0 337
ENST00000621359 MSH2-206 protein_coding Homo_sapiens 0 337

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