C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene, 18734
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000172937 Gm18734-001 ENSMUSG00000092438 10090 - 17:35304206-35306317 unprocessed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastLiverPlacentaENSMUST00000172937
Transcript ID Adipose Bladder Brain Breast Liver Placenta
ENSMUST00000172937 0.053±0.00 0.495±0.00 0.227±0.00 0.124±0.00 0.243±0.06 0.064±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000383210 VPS52-001 protein_coding Homo_sapiens 0 219
ENST00000421357 VPS52-001 protein_coding Homo_sapiens 0 219
ENST00000428608 VPS52-001 protein_coding Homo_sapiens 0 219
ENST00000441058 VPS52-001 protein_coding Homo_sapiens 0 219
ENST00000443860 VPS52-001 protein_coding Homo_sapiens 0 219
ENST00000445902 VPS52-001 protein_coding Homo_sapiens 0 219
ENST00000448042 VPS52-001 protein_coding Homo_sapiens 0 219
ENST00000459865 VPS52-010 processed_transcript Homo_sapiens 0 219
ENST00000461476 VPS52-007 nonsense_mediated_decay Homo_sapiens 0 219
ENST00000462081 VPS52-010 processed_transcript Homo_sapiens 0 219
ENST00000462479 VPS52-007 protein_coding Homo_sapiens 0 219
ENST00000463476 VPS52-011 processed_transcript Homo_sapiens 0 219
ENST00000465355 VPS52-010 processed_transcript Homo_sapiens 0 219
ENST00000467000 VPS52-010 processed_transcript Homo_sapiens 0 219
ENST00000470858 VPS52-011 processed_transcript Homo_sapiens 0 219
ENST00000471761 VPS52-002 processed_transcript Homo_sapiens 0 219
ENST00000471922 VPS52-011 processed_transcript Homo_sapiens 0 219
ENST00000473365 VPS52-011 processed_transcript Homo_sapiens 0 219
ENST00000475520 VPS52-011 processed_transcript Homo_sapiens 0 219
ENST00000476725 VPS52-007 nonsense_mediated_decay Homo_sapiens 0 219
ENST00000478392 VPS52-007 nonsense_mediated_decay Homo_sapiens 0 219
ENST00000478934 VPS52-002 processed_transcript Homo_sapiens 0 219
ENST00000479062 VPS52-010 processed_transcript Homo_sapiens 0 219
ENST00000482399 VPS52-007 protein_coding Homo_sapiens 0 219
ENST00000483351 VPS52-002 processed_transcript Homo_sapiens 0 219
ENST00000484649 VPS52-002 processed_transcript Homo_sapiens 0 219
ENST00000485418 VPS52-002 processed_transcript Homo_sapiens 0 219
ENST00000487764 VPS52-010 processed_transcript Homo_sapiens 0 219
ENST00000488583 VPS52-002 processed_transcript Homo_sapiens 0 219
ENST00000489236 VPS52-002 processed_transcript Homo_sapiens 0 219
ENST00000489636 VPS52-007 retained_intron Homo_sapiens 0 219
ENST00000493674 VPS52-011 processed_transcript Homo_sapiens 0 219
ENST00000494451 VPS52-011 processed_transcript Homo_sapiens 0 219
ENST00000495981 VPS52-010 processed_transcript Homo_sapiens 0 219
ENST00000497240 VPS52-007 nonsense_mediated_decay Homo_sapiens 0 219

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