C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | opsin 1 (cone pigments), short-wave-sensitive (color blindness, tritan) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000173653  |
Opn1sw-004 |
ENSMUSG00000058831 |
10090 | - |
6:29379373-29388468  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0004FD | CIL_0004FD_0002 | CGP | 6:29319140-29377110 |
| CIL_0005UE | CIL_0005UE_0003 | CGP | 6:29348069-29388468 |
| CIL_0001YA | CIL_0001YA_0002 | CGP | 6:29376671-29426994 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0001750 | IDA | photoreceptor outer segment |
| GO:0004930 | IEA | G-protein coupled receptor activity |
| GO:0007186 | IEA | G-protein coupled receptor signaling pathway |
| GO:0007602 | IEA | phototransduction |
| GO:0016021 | IEA | integral component of membrane |
Homologs | |||||
| No Homologs available. | |||||
|---|---|---|---|---|---|
