C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: SET and MYND domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000173730 Smyd1-008 ENSMUSG00000055027 10090 - 6:71215500-71216874 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyOvaryPlacentaENSMUST00000173730
Transcript ID Kidney Ovary Placenta
ENSMUST00000173730 0.387±0.00 0.106±0.00 0.334±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004Q7 CIL_0004Q7_0002 CGP 6:71199827-71322233

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003714 IDA transcription corepressor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006338 IPI chromatin remodeling
GO:0007507 IMP heart development
GO:0035914 IMP skeletal muscle cell differentiation
GO:0045892 IDA negative regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000419482 SMYD1-001 protein_coding Homo_sapiens 0 224
ENST00000444564 SMYD1-002 protein_coding Homo_sapiens 0 224

Loading