C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: RAB2B, member RAS oncogene family
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000174020 Rab2b-006 ENSMUSG00000022159 10090 - 14:52263710-52279241 nonsense_mediated_decay

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003JD CIL_0003JD_0002 CGP 14:52198151-52279545
CIL_0008CX CIL_0008CX_0002 VISTA 14:52247406-52849170
CIL_0005QL CIL_0005QL_0002 CGP 14:52261759-52296391

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005525 IEA GTP binding
GO:0007264 IEA small GTPase mediated signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000003940 rab2a-001 protein_coding Danio_rerio 8e-37 158
ENST00000397762 RAB2B-001 protein_coding Homo_sapiens 0 531
ENST00000417141 RAB2B-007 nonsense_mediated_decay Homo_sapiens 0 355
ENST00000461909 RAB2B-006 processed_transcript Homo_sapiens 0 496
ENST00000475857 RAB2B-004 processed_transcript Homo_sapiens 0 298
ENST00000485996 RAB2B-005 processed_transcript Homo_sapiens 8.40779e-45 183
ENST00000622293 RAB2B-201 protein_coding Homo_sapiens 0 497

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