C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: 5,10-methylenetetrahydrofolate reductase, pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000174153 Mthfr-ps1-001 ENSMUSG00000044058 10090 + 5:78473885-78474735 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartPlacentaENSMUST00000174153
Transcript ID Heart Placenta
ENSMUST00000174153 0.114±0.00 0.566±0.36

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001WQ CIL_0001WQ_0002 CGP 5:77349240-81825133
CIL_000934 CIL_000934_0002 VISTA 5:77983386-78585475

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000376583 MTHFR-201 protein_coding Homo_sapiens 0 608
ENST00000376585 MTHFR-007 protein_coding Homo_sapiens 0 608
ENST00000376590 MTHFR-002 protein_coding Homo_sapiens 0 536
ENST00000376592 MTHFR-001 protein_coding Homo_sapiens 0 542
ENST00000418034 MTHFR-004 protein_coding Homo_sapiens 0 475

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