C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glucosaminyl (N-acetyl) transferase 1, core 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000174236 Gcnt1-001 ENSMUSG00000038843 10090 - 19:17326141-17356667 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000174236
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000174236 2.918±1.97 0.340±0.13 4.994±0.69 0.183±0.03 2.825±0.75 8.285±2.35 0.639±0.07 29.823±0.00 6.954±6.34 2.397±0.21 0.106±0.10 8.219±3.41 4.564±1.80 0.096±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009AK CIL_0009AK_0002 VISTA 19:16783804-17385681

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003829 IEA beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase activity
GO:0005515 IEA protein binding
GO:0005615 IEA extracellular space
GO:0005802 IEA trans-Golgi network
GO:0006486 IEA protein glycosylation
GO:0009101 ISS glycoprotein biosynthetic process
GO:0016021 IEA integral component of membrane
GO:0031985 ISS Golgi cisterna
GO:0032868 IEA response to insulin
GO:0048729 IGI tissue morphogenesis
GO:0050901 ISS leukocyte tethering or rolling
GO:0060352 ISS cell adhesion molecule production
GO:0060993 IGI kidney morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000376730 GCNT1-001 protein_coding Homo_sapiens 0 1214
ENST00000442371 GCNT1-201 protein_coding Homo_sapiens 0 1214
ENST00000444201 GCNT1-202 protein_coding Homo_sapiens 0 1214

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