C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0009AK_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1814 VISTA 9606 9:76449809-77051957
GeneTranscriptPositionBiotype
ENSG00000106772 (PRUNE2)
prune homolog 2 (Drosophila) 		ENST00000223609 (PRUNE2-201) 76611377-76692200 protein_coding
ENST00000376713 (PRUNE2-011) 76788344-76906085 protein_coding
ENST00000376717 (PRUNE2-007) 76611376-76692193 protein_coding
ENST00000376718 (PRUNE2-003) 76611377-76906087 protein_coding
ENST00000424866 (PRUNE2-010) 76614450-76652549 protein_coding
ENST00000426088 (PRUNE2-006) 76614289-76710237 protein_coding
ENST00000428286 (PRUNE2-202) 76611481-76906041 protein_coding
ENST00000443509 (PRUNE2-203) 76611481-76906041 protein_coding
ENST00000464414 (PRUNE2-005) 76614008-76615162 processed_transcript
ENST00000466266 (PRUNE2-004) 76611376-76692200 processed_transcript
ENST00000480674 (PRUNE2-009) 76651968-76703438 processed_transcript
ENST00000488346 (PRUNE2-001) 76644497-76692167 processed_transcript
ENST00000489555 (PRUNE2-013) 76846599-76869182 processed_transcript
ENST00000492157 (PRUNE2-012) 76823248-76906087 processed_transcript
ENST00000494975 (PRUNE2-002) 76641947-76645138 processed_transcript
ENSG00000187210 (GCNT1)
glucosaminyl (N-acetyl) transferase 1, core 2 		ENST00000376730 (GCNT1-001) 76459230-76507416 protein_coding
ENST00000442371 (GCNT1-201) 76441666-76507414 protein_coding
ENST00000444201 (GCNT1-202) 76459152-76507414 protein_coding
ENST00000480311 (GCNT1-002) 76459222-76502469 processed_transcript
ENST00000488136 (GCNT1-003) 76419850-76502416 processed_transcript
ENSG00000204612 (FOXB2)
forkhead box B2 		ENST00000376708 (FOXB2-001) 77019655-77020953 protein_coding
ENSG00000219149 (RP11-214N16.2)
 ENST00000441480 (RP11-214N16.2-001) 76549282-76549771 processed_pseudogene
ENSG00000225937 (PCA3)
prostate cancer associated 3 (non-protein coding) 		ENST00000412654 (PCA3-001) 76764436-76787569 antisense
ENSG00000229857 (RP11-159H20.3)
 ENST00000451571 (RP11-159H20.3-001) 76992099-76993108 processed_pseudogene
ENSG00000241781 (AL161626.1)
 ENST00000463508 (AL161626.1-201) 76571815-76571871 miRNA
ENSG00000265488 (AL359314.1)
 ENST00000578375 (AL359314.1-201) 76666086-76666171 miRNA
ENSG00000274326 (PCA3_1)
Prostate cancer antigen RNA 3 conserved region 1 		ENST00000616913 (PCA3_1.1-201) 76779657-76779917 misc_RNA
ENSG00000277320 (PCA3_2)
Prostate cancer antigen RNA 3 conserved region 2 		ENST00000612507 (PCA3_2.1-201) 76785782-76786190 misc_RNA
CIL_0009AK_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1814 VISTA 10090 19:16783804-17385681
GeneTranscriptPositionBiotype
ENSMUSG00000038843 (Gcnt1)
glucosaminyl (N-acetyl) transferase 1, core 2 		ENSMUST00000169897 (Gcnt1-201) 17326143-17339568 protein_coding
ENSMUST00000174137 (Gcnt1-002) 17332246-17356667 retained_intron
ENSMUST00000174236 (Gcnt1-001) 17326141-17356667 protein_coding
ENSMUSG00000039126 (Prune2)
prune homolog 2 (Drosophila) 		ENSMUST00000087689 (Prune2-201) 16956118-17223932 protein_coding
ENSMUSG00000056829 (Foxb2)
forkhead box B2 		ENSMUST00000072915 (Foxb2-201) 16872316-16873830 protein_coding
ENSMUSG00000098298 (Gm27970)
predicted gene, 27970 		ENSMUST00000184854 (Gm27970-201) 17056781-17057187 misc_RNA
ENSMUSG00000099316 (Gm27796)
predicted gene, 27796 		ENSMUST00000183863 (Gm27796-201) 17060137-17060397 misc_RNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0009AK_0001ENSG00000106772ENST00000223609ENST00000376713ENST00000376717ENST00000376718ENST00000424866ENST00000426088ENST00000428286ENST00000443509ENST00000464414ENST00000466266ENST00000480674ENST00000488346ENST00000489555ENST00000492157ENST00000494975ENSG00000187210ENST00000376730ENST00000442371ENST00000444201ENST00000480311ENST00000488136ENSG00000204612ENST00000376708ENSG00000219149ENST00000441480ENSG00000225937ENST00000412654ENSG00000229857ENST00000451571ENSG00000241781ENST00000463508ENSG00000265488ENST00000578375ENSG00000274326ENST00000616913ENSG00000277320ENST00000612507CIL_0009AK_0002ENSMUSG00000038843ENSMUST00000169897ENSMUST00000174137ENSMUST00000174236ENSMUSG00000039126ENSMUST00000087689ENSMUSG00000056829ENSMUST00000072915ENSMUSG00000098298ENSMUST00000184854ENSMUSG00000099316ENSMUST00000183863
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0009AK_0001ENSG00000106772ENST00000223609ENST00000376717ENST00000376718ENST00000424866ENST00000426088ENST00000428286ENST00000443509ENST00000466266ENSG00000187210ENST00000376730ENST00000442371ENST00000444201ENST00000480311ENSG00000204612ENST00000376708ENSG00000219149ENST00000441480ENSG00000225937ENST00000412654ENSG00000229857ENST00000451571ENSG00000241781ENST00000463508ENSG00000265488ENST00000578375ENSG00000274326ENST00000616913ENSG00000277320ENST00000612507CIL_0009AK_0002ENSMUSG00000038843ENSMUST00000169897ENSMUST00000174137ENSMUST00000174236ENSMUSG00000039126ENSMUST00000087689ENSMUSG00000056829ENSMUST00000072915ENSMUSG00000098298ENSMUST00000184854ENSMUSG00000099316ENSMUST00000183863
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000106772 ENST00000223609 1.136±0.00 6.086±0.00 N/A 10.739±0.00 N/A 18.265±0.00 N/A N/A 0.128±0.00 N/A N/A 3.942±2.19 10.748±0.00 3.023±0.62
ENST00000376713 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000376717 N/A N/A N/A 11.081±3.30 N/A N/A N/A N/A N/A N/A N/A 1.238±0.00 0.936±0.00 1.432±1.01
ENST00000376718 N/A N/A N/A 2.263±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000424866 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.684±0.00
ENST00000426088 0.524±0.00 1.903±0.00 N/A 3.633±0.00 0.318±0.00 6.267±0.00 0.055±0.00 0.704±0.43 0.063±0.00 0.707±0.10 N/A 0.823±0.29 1.608±0.87 1.124±0.84
ENST00000428286 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.143±0.00 0.076±0.00 N/A N/A N/A
ENST00000443509 0.596±0.00 1.633±0.00 1.636±0.00 1.519±0.00 6.322±0.00 2.897±0.03 0.127±0.00 0.903±0.00 10.259±0.00 0.832±0.00 1.298±0.00 1.156±0.50 1.214±0.76 0.598±0.46
ENST00000464414 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466266 N/A N/A N/A N/A N/A N/A N/A 3.167±0.00 0.110±0.00 2.608±0.00 N/A 2.481±0.00 N/A N/A
ENST00000480674 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488346 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489555 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492157 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494975 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000187210 ENST00000376730 0.344±0.00 N/A 0.221±0.00 N/A 1.722±0.00 0.678±0.34 0.065±0.00 0.227±0.00 0.344±0.00 N/A N/A 1.310±1.16 1.640±0.46 0.609±0.23
ENST00000442371 N/A N/A N/A N/A 0.285±0.00 N/A N/A 0.164±0.00 0.211±0.00 N/A N/A N/A N/A 0.166±0.00
ENST00000444201 0.370±0.00 0.952±0.00 N/A 0.449±0.00 0.689±0.00 0.629±0.00 0.272±0.00 0.343±0.00 0.246±0.00 1.275±0.00 0.166±0.00 0.561±0.27 1.076±0.21 0.531±0.00
ENST00000480311 N/A N/A N/A N/A N/A N/A N/A 0.478±0.00 N/A N/A 0.844±0.45 N/A N/A N/A
ENST00000488136 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000204612 ENST00000376708 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.101±0.06
ENSG00000219149 ENST00000441480 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.027±0.00 0.025±0.00 N/A N/A N/A
ENSG00000225937 ENST00000412654 N/A 0.066±0.00 N/A 0.171±0.00 N/A 0.083±0.00 0.023±0.01 0.064±0.05 0.022±0.00 N/A 0.021±0.01 0.013±0.00 0.016±0.01 0.044±0.00
ENSG00000229857 ENST00000451571 N/A 0.052±0.00 N/A N/A N/A N/A N/A 0.076±0.00 N/A N/A N/A 0.044±0.00 0.012±0.00 N/A
ENSG00000241781 ENST00000463508 N/A N/A N/A N/A N/A N/A 1.387±0.00 1.447±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000265488 ENST00000578375 N/A 0.352±0.00 N/A 0.368±0.00 1.092±0.00 N/A N/A N/A 1.329±0.00 N/A N/A 34.629±33.94 N/A 1.591±0.00
ENSG00000274326 ENST00000616913 N/A N/A N/A 0.804±0.23 10.663±0.00 0.413±0.03 N/A N/A 1.259±0.00 N/A N/A 1.353±0.28 N/A 0.275±0.00
ENSG00000277320 ENST00000612507 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.172±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000038843 ENSMUST00000169897 N/A N/A N/A 0.047±0.00 N/A N/A N/A 38.563±0.00 0.043±0.01 N/A 0.027±0.02 1.125±0.25 0.867±0.00 0.029±0.00
ENSMUST00000174137 N/A 0.346±0.22 N/A N/A 0.997±0.21 N/A N/A N/A N/A N/A N/A N/A N/A 0.060±0.01
ENSMUST00000174236 2.918±1.97 0.340±0.13 4.994±0.69 0.183±0.03 2.825±0.75 8.285±2.35 0.639±0.07 29.823±0.00 6.954±6.34 2.397±0.21 0.106±0.10 8.219±3.41 4.564±1.80 0.096±0.05
ENSMUSG00000039126 ENSMUST00000087689 2.238±1.67 0.885±0.24 3.357±2.04 0.720±0.48 1.181±0.43 0.410±0.26 5.212±1.13 0.155±0.07 0.037±0.01 0.571±0.17 0.310±0.16 1.114±0.54 2.693±1.28 0.103±0.02
ENSMUSG00000056829 ENSMUST00000072915 N/A N/A N/A 0.191±0.11 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.313±0.07
ENSMUSG00000098298 ENSMUST00000184854 0.196±0.02 N/A 0.097±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.117±0.00 0.231±0.08 N/A
ENSMUSG00000099316 ENSMUST00000183863 N/A N/A 0.089±0.00 0.089±0.00 N/A N/A N/A N/A N/A N/A N/A 0.474±0.00 0.320±0.03 N/A

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