C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: sorting nexin family member 21
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000174342 Snx21-007 ENSMUSG00000050373 10090 + 2:164791652-164793808 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainTestisENSMUST00000174342
Transcript ID Brain Testis
ENSMUST00000174342 3.823±0.00 1.958±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000IO CIL_0000IO_0002 CGP 2:164777161-164793816
CIL_00002M CIL_00002M_0002 CGP 2:164785823-164804882

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000342644 SNX21-011 protein_coding Homo_sapiens 0 215
ENST00000344780 SNX21-004 processed_transcript Homo_sapiens 0 861
ENST00000372541 SNX21-006 protein_coding Homo_sapiens 0 387
ENST00000372542 SNX21-003 protein_coding Homo_sapiens 0 861
ENST00000372547 SNX21-001 retained_intron Homo_sapiens 0 865
ENST00000462307 SNX21-005 protein_coding Homo_sapiens 0 662
ENST00000465997 SNX21-002 processed_transcript Homo_sapiens 0 616
ENST00000472219 SNX21-012 processed_transcript Homo_sapiens 0 865
ENST00000478230 SNX21-008 processed_transcript Homo_sapiens 0 702
ENST00000486336 SNX21-009 retained_intron Homo_sapiens 0 468
ENST00000491381 SNX21-010 protein_coding Homo_sapiens 0 861

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