C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene, 18733
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000174447 Gm18733-001 ENSMUSG00000092444 10090 - 17:35278176-35279231 transcribed_unprocessed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastHeartKidneyLiverPlacentaTestisENSMUST00000174447
Transcript ID Adrenal Brain Breast Heart Kidney Liver Placenta Testis
ENSMUST00000174447 0.219±0.00 9.853±9.79 0.129±0.00 0.433±0.00 0.174±0.06 0.178±0.19 1.501±1.05 11.900±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000383210 VPS52-001 protein_coding Homo_sapiens 0 353
ENST00000428608 VPS52-001 protein_coding Homo_sapiens 0 353
ENST00000441058 VPS52-001 protein_coding Homo_sapiens 0 353
ENST00000443860 VPS52-001 protein_coding Homo_sapiens 0 353
ENST00000445902 VPS52-001 protein_coding Homo_sapiens 0 353
ENST00000448042 VPS52-001 protein_coding Homo_sapiens 0 353
ENST00000461168 VPS52-003 retained_intron Homo_sapiens 0 324
ENST00000461476 VPS52-007 nonsense_mediated_decay Homo_sapiens 0 353
ENST00000463636 VPS52-003 retained_intron Homo_sapiens 0 324
ENST00000471761 VPS52-002 processed_transcript Homo_sapiens 0 272
ENST00000475750 VPS52-003 retained_intron Homo_sapiens 0 324
ENST00000476725 VPS52-007 nonsense_mediated_decay Homo_sapiens 0 353
ENST00000478392 VPS52-007 nonsense_mediated_decay Homo_sapiens 0 353
ENST00000478934 VPS52-002 processed_transcript Homo_sapiens 0 272
ENST00000482399 VPS52-007 protein_coding Homo_sapiens 0 353
ENST00000482849 VPS52-003 processed_transcript Homo_sapiens 0 324
ENST00000483351 VPS52-002 processed_transcript Homo_sapiens 0 272
ENST00000484169 VPS52-003 retained_intron Homo_sapiens 0 324
ENST00000484649 VPS52-002 processed_transcript Homo_sapiens 0 272
ENST00000488583 VPS52-002 processed_transcript Homo_sapiens 0 272
ENST00000489236 VPS52-002 processed_transcript Homo_sapiens 0 272
ENST00000489636 VPS52-007 retained_intron Homo_sapiens 0 353
ENST00000493379 VPS52-003 retained_intron Homo_sapiens 0 324
ENST00000497240 VPS52-007 nonsense_mediated_decay Homo_sapiens 0 353

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