C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glycophorin C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000174459 Gypc-001 ENSMUSG00000090523 10090 - 18:32528322-32560034 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000174459
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000174459 24.106±4.69 10.563±0.78 14.568±0.30 2.272±0.20 22.742±6.15 4.851±0.73 14.590±0.95 4.204±0.29 33.022±30.77 11.542±0.89 12.619±2.12 11.097±3.98 4.129±2.22 0.801±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007V0 CIL_0007V0_0002 VISTA 18:32241944-32843241

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005886 IEA plasma membrane
GO:0008150 ND biological_process
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0030863 IDA cortical cytoskeleton

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000253144 ZNF331-008 protein_coding Homo_sapiens 0.00000000002 77
ENST00000261994 SERPINA10-001 protein_coding Homo_sapiens 0.0000002 64
ENST00000326786 ETV3-001 protein_coding Homo_sapiens 0.000002 58
ENST00000393096 SERPINA10-201 protein_coding Homo_sapiens 0.00000007 64
ENST00000449416 ZNF331-201 protein_coding Homo_sapiens 0.00000000001 77
ENST00000554173 SERPINA10-003 protein_coding Homo_sapiens 0.00000006 64
ENST00000554723 SERPINA10-002 protein_coding Homo_sapiens 0.00000008 64
ENST00000614630 SERPINA10-202 protein_coding Homo_sapiens 0.00000006 64
ENST00000616057 SERPINA10-203 protein_coding Homo_sapiens 0.00000007 64

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