C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: KRR1, small subunit (SSU) processome component, homolog (yeast)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000174653 Krr1-004 ENSMUSG00000063334 10090 + 10:111972793-111984681 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000174653
Transcript ID Adipose Brain Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000174653 1.533±0.02 8.555±0.00 2.575±0.64 3.892±0.56 2.742±1.83 3.586±0.32 4.540±5.25 10.523±5.05 4.342±2.48

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229214 KRR1-001 protein_coding Homo_sapiens 0 667
ENST00000266659 GLIPR1-001 protein_coding Homo_sapiens 3e-35 156
ENST00000419430 KRR1P1-001 processed_pseudogene Homo_sapiens 0 209
ENST00000438169 KRR1-003 protein_coding Homo_sapiens 0 1024
ENST00000550023 KRR1-002 retained_intron Homo_sapiens 0 512
ENST00000550898 KRR1-004 retained_intron Homo_sapiens 0 363
ENST00000551070 KRR1-005 retained_intron Homo_sapiens 0 339
ENST00000612627 KRR1-201 protein_coding Homo_sapiens 0 667

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