C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: RIKEN cDNA A230050P20 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000176142 A230050P20Rik-004 ENSMUSG00000038884 10090 + 9:20868680-20870095 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000176142
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000176142 29.613±0.00 14.125±0.00 5.091±2.57 0.450±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004G7 CIL_0004G7_0002 CGP 9:20818504-20874307
CIL_0004G5 CIL_0004G5_0002 CGP 9:20868642-20879727

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000253110 C19orf66-001 protein_coding Homo_sapiens 0 217
ENST00000397881 C19orf66-004 protein_coding Homo_sapiens 4.2039e-45 187
ENST00000585919 C19orf66-003 retained_intron Homo_sapiens 0 217
ENST00000587710 C19orf66-008 nonsense_mediated_decay Homo_sapiens 0 217
ENST00000590378 C19orf66-010 protein_coding Homo_sapiens 1.4013e-45 187
ENST00000591813 C19orf66-002 protein_coding Homo_sapiens 0 217
ENST00000592551 C19orf66-006 retained_intron Homo_sapiens 0 217

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