C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: connective tissue growth factor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000176228 Ctgf-003 ENSMUSG00000019997 10090 + 10:24595726-24598683 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastLiverOvaryENSMUST00000176228
Transcript ID Breast Liver Ovary
ENSMUST00000176228 1.437±0.00 0.169±0.00 3.351±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00097U CIL_00097U_0002 VISTA 10:24193263-24794942

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001502 IDA cartilage condensation
GO:0001503 IMP ossification
GO:0001525 IDA angiogenesis
GO:0001558 IEA regulation of cell growth
GO:0001894 IMP tissue homeostasis
GO:0005178 IDA integrin binding
GO:0005520 IEA insulin-like growth factor binding
GO:0005576 IDA extracellular region
GO:0005578 IDA proteinaceous extracellular matrix
GO:0007160 IDA cell-matrix adhesion
GO:0007229 IDA integrin-mediated signaling pathway
GO:0008201 IDA heparin binding
GO:0008543 IDA fibroblast growth factor receptor signaling pathway
GO:0010629 IMP negative regulation of gene expression
GO:0016477 IDA cell migration
GO:0030154 IDA cell differentiation
GO:0030324 IMP lung development
GO:0032330 IMP regulation of chondrocyte differentiation
GO:0035988 IMP chondrocyte proliferation
GO:0061448 IMP connective tissue development
GO:0072593 IDA reactive oxygen species metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000367976 CTGF-001 protein_coding Homo_sapiens 0 891

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