C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glycosylated lysosomal membrane protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000176425 0610031J06Rik-007 ENSMUSG00000001418 10090 + 3:88325082-88328368 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000176425
Transcript ID Adipose Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000176425 36.738±6.24 29.600±3.48 30.974±3.34 37.625±6.32 10.897±2.77 50.766±3.03 14.653±3.86 39.238±5.13 5.460±1.07 27.798±7.22 55.081±6.90 2.956±1.75

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008JO CIL_0008JO_0002 VISTA 3:87838105-88441065
CIL_0008P5 CIL_0008P5_0002 VISTA 3:88218217-88823366
CIL_000898 CIL_000898_0002 VISTA 3:88224783-88827970

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000368264 C1orf85-006 nonsense_mediated_decay Homo_sapiens 0 436
ENST00000484214 C1orf85-005 retained_intron Homo_sapiens 0 436
ENST00000622703 C1orf85-203 protein_coding Homo_sapiens 0 795

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