C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: POU domain, class 2, transcription factor 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000176636 Pou2f3-002 ENSMUSG00000032015 10090 - 9:43124540-43205755 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000176636
Transcript ID Brain Breast Colon Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000176636 0.107±0.00 0.042±0.03 0.130±0.00 0.125±0.00 0.018±0.00 0.075±0.00 0.172±0.15 3.452±0.00 0.274±0.03

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000978 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0001077 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0003677 IDA DNA binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005667 IDA transcription factor complex
GO:0005737 IEA cytoplasm
GO:0008544 IGI epidermis development
GO:0030216 IGI keratinocyte differentiation
GO:0042060 IMP wound healing
GO:0043565 IDA sequence-specific DNA binding
GO:0043922 IEA negative regulation by host of viral transcription
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0046983 IDA protein dimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000133371 pou2f2a-001 protein_coding Danio_rerio 0 220
ENSDART00000014127 pou2f2a-201 protein_coding Danio_rerio 9e-36 156
ENSDART00000110243 pou3f2a-201 protein_coding Danio_rerio 2e-32 145
ENSDART00000149202 pou3f3b-001 protein_coding Danio_rerio 0.00000006 64
ENSDART00000149949 pou3f3b-002 protein_coding Danio_rerio 0.00000006 64
ENST00000260264 POU2F3-006 protein_coding Homo_sapiens 0 1576
ENST00000342301 POU2F2-002 protein_coding Homo_sapiens 0 250
ENST00000389341 POU2F2-001 protein_coding Homo_sapiens 0 250
ENST00000526816 POU2F2-005 protein_coding Homo_sapiens 0 250
ENST00000526831 POU2F2-010 protein_coding Homo_sapiens 0 219
ENST00000528894 POU2F2-009 protein_coding Homo_sapiens 0 241
ENST00000529039 POU2F3-004 retained_intron Homo_sapiens 0 270
ENST00000529067 POU2F2-003 protein_coding Homo_sapiens 0 250
ENST00000529952 POU2F2-004 protein_coding Homo_sapiens 0 250
ENST00000532638 POU2F3-003 retained_intron Homo_sapiens 0 996
ENST00000532663 POU2F3-005 protein_coding Homo_sapiens 0 399
ENST00000533620 POU2F3-002 nonsense_mediated_decay Homo_sapiens 0 1275
ENST00000534559 POU2F2-006 nonsense_mediated_decay Homo_sapiens 0 250
ENST00000543440 POU2F3-001 protein_coding Homo_sapiens 0 1712
ENST00000560398 POU2F2-017 protein_coding Homo_sapiens 0 250
ENST00000560558 POU2F2-016 protein_coding Homo_sapiens 0 250
ENST00000560804 POU2F2-015 protein_coding Homo_sapiens 0 250

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