C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: POU class 2 homeobox 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000543440 POU2F3-001 ENSG00000137709 9606 + 11:120240194-120318884 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonLungOvaryENST00000543440
Transcript ID Adipose Breast Colon Lung Ovary
ENST00000543440 0.029±0.00 0.048±0.00 0.071±0.00 0.313±0.00 0.430±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00021Y CIL_00021Y_0002 CGP 11:120210767-120319944

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000978 IMP RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0001077 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006357 TAS regulation of transcription from RNA polymerase II promoter
GO:0008544 TAS epidermis development
GO:0043565 IDA sequence-specific DNA binding
GO:0043922 IDA negative regulation by host of viral transcription
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000176636 Pou2f3-002 protein_coding Mus_musculus 0 1712
ENSMUST00000034513 Pou2f3-001 protein_coding Mus_musculus 0 1578
ENSMUST00000120271 Pou2f3-rs1-001 processed_pseudogene Mus_musculus 0 1002
ENSMUST00000176408 Pou2f2-010 protein_coding Mus_musculus 0 272
ENSMUST00000108413 Pou2f2-007 protein_coding Mus_musculus 0 272
ENSMUST00000108416 Pou2f2-008 protein_coding Mus_musculus 0 272
ENSMUST00000108417 Pou2f2-002 protein_coding Mus_musculus 0 272
ENSMUST00000108418 Pou2f2-004 protein_coding Mus_musculus 0 272
ENSMUST00000098679 Pou2f2-003 protein_coding Mus_musculus 0 272
ENSMUST00000108415 Pou2f2-005 protein_coding Mus_musculus 0 272
ENSMUST00000175774 Pou2f2-001 protein_coding Mus_musculus 0 272
ENSMUST00000053491 Pou3f1-001 protein_coding Mus_musculus 6e-33 147
ENSMUST00000054883 Pou3f3-001 protein_coding Mus_musculus 0.00000000003 75

Loading