C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: POU class 2 homeobox 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000529067 POU2F2-003 ENSG00000028277 9606 - 19:42090205-42132465 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonHeartLungTestisENST00000529067
Transcript ID Bladder Breast Colon Heart Lung Testis
ENST00000529067 0.012±0.00 0.374±0.00 0.331±0.00 0.011±0.00 1.507±0.00 0.892±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003DQ CIL_0003DQ_0001 CGP 19:42068477-42196585
CIL_0003X4 CIL_0003X4_0001 CGP 19:42086110-42220140

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006366 TAS transcription from RNA polymerase II promoter
GO:0006959 TAS humoral immune response
GO:0043565 IDA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000108413 Pou2f2-007 protein_coding Mus_musculus 0 2287
ENSMUST00000175774 Pou2f2-001 protein_coding Mus_musculus 0 1821
ENSMUST00000108418 Pou2f2-004 protein_coding Mus_musculus 0 1803
ENSMUST00000108417 Pou2f2-002 protein_coding Mus_musculus 0 1502
ENSMUST00000098679 Pou2f2-003 protein_coding Mus_musculus 0 1502
ENSMUST00000108416 Pou2f2-008 protein_coding Mus_musculus 0 1306
ENSMUST00000176408 Pou2f2-010 protein_coding Mus_musculus 0 1016
ENSMUST00000108415 Pou2f2-005 protein_coding Mus_musculus 0 1016
ENSDART00000133371 pou2f2a-001 protein_coding Danio_rerio 0 392
ENSDART00000049323 pou2f2b-201 protein_coding Danio_rerio 0 377
ENSDART00000141032 pou2f2b-001 protein_coding Danio_rerio 0 377
ENSDART00000014127 pou2f2a-201 protein_coding Danio_rerio 0 333
ENSMUST00000176636 Pou2f3-002 protein_coding Mus_musculus 0 250
ENSMUST00000034513 Pou2f3-001 protein_coding Mus_musculus 0 250
ENSMUST00000175754 Pou2f2-006 retained_intron Mus_musculus 0 230
ENSMUST00000147146 Pou2f2-009 protein_coding Mus_musculus 0 198
ENSDART00000110243 pou3f2a-201 protein_coding Danio_rerio 2e-38 165

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