C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA A230050P20 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000177067 A230050P20Rik-003 ENSMUSG00000038884 10090 + 9:20869277-20873771 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000177067
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000177067 7.606±2.22 18.197±3.48 9.682±2.94 21.522±0.00 12.869±4.21 6.827±0.67 1.808±0.00 3.407±1.21 17.591±7.84 12.094±1.71 21.353±3.64 4.225±1.79 0.454±0.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004G7 CIL_0004G7_0002 CGP 9:20818504-20874307
CIL_0004G5 CIL_0004G5_0002 CGP 9:20868642-20879727

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000253110 C19orf66-001 protein_coding Homo_sapiens 0 464
ENST00000397881 C19orf66-004 protein_coding Homo_sapiens 0 193
ENST00000585919 C19orf66-003 retained_intron Homo_sapiens 0 933
ENST00000587710 C19orf66-008 nonsense_mediated_decay Homo_sapiens 1.4013e-45 187
ENST00000590378 C19orf66-010 protein_coding Homo_sapiens 0 193
ENST00000591813 C19orf66-002 protein_coding Homo_sapiens 0 462
ENST00000592551 C19orf66-006 retained_intron Homo_sapiens 0 189

Loading