C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000177098 Apobec3-007 ENSMUSG00000009585 10090 + 15:79892455-79915906 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastColonHeartLiverOvaryENSMUST00000177098
Transcript ID Adipose Bladder Breast Colon Heart Liver Ovary
ENSMUST00000177098 8.198±0.00 15.620±1.01 24.102±2.13 10.849±2.73 2.598±0.00 7.869±0.48 7.717±2.84

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002244 IGI hematopoietic progenitor cell differentiation
GO:0008152 IEA metabolic process
GO:0008270 IEA zinc ion binding
GO:0016814 IEA hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000216133 CBX7-001 protein_coding Homo_sapiens 4e-27 128

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