C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene, 18588
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000177308 Gm18588-001 ENSMUSG00000093402 10090 - 3:68902267-68902758 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000177308
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000177308 9.917±2.41 3.413±0.56 0.248±0.07 1.888±0.72 12.499±3.37 3.042±2.21 4.376±1.38 6.215±2.37 3.342±2.96 7.697±1.09 0.229±0.10 14.311±9.67 0.221±0.13 8.035±1.84

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004JR CIL_0004JR_0003 CGP 3:68892499-69034623

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000361556 OSBPL9-006 protein_coding Homo_sapiens 0 676
ENST00000371707 OSBPL9P4-001 processed_pseudogene Homo_sapiens 0 250
ENST00000371714 OSBPL9-004 protein_coding Homo_sapiens 0 676
ENST00000428468 OSBPL9-001 protein_coding Homo_sapiens 0 368
ENST00000435274 OSBPL9-015 nonsense_mediated_decay Homo_sapiens 0 676
ENST00000447887 OSBPL9-002 protein_coding Homo_sapiens 0 676
ENST00000453295 OSBPL9-005 protein_coding Homo_sapiens 0 368
ENST00000462759 OSBPL9-007 protein_coding Homo_sapiens 0 676
ENST00000467064 OSBPL9-012 retained_intron Homo_sapiens 0 228
ENST00000473207 OSBPL9-022 processed_transcript Homo_sapiens 0 311
ENST00000475697 OSBPL9-014 retained_intron Homo_sapiens 0 366
ENST00000481937 OSBPL9-011 protein_coding Homo_sapiens 0 233
ENST00000484890 OSBPL9-013 retained_intron Homo_sapiens 0 311
ENST00000486942 OSBPL9-008 protein_coding Homo_sapiens 0 568
ENST00000489990 OSBPL9-009 nonsense_mediated_decay Homo_sapiens 0 311
ENST00000495776 OSBPL9-003 nonsense_mediated_decay Homo_sapiens 0 368
ENST00000524620 OSBPL9-023 processed_transcript Homo_sapiens 0 239
ENST00000526917 OSBPL9-021 nonsense_mediated_decay Homo_sapiens 0 411
ENST00000527631 OSBPL9-019 protein_coding Homo_sapiens 0 311
ENST00000528603 OSBPL9-024 nonsense_mediated_decay Homo_sapiens 0 366
ENST00000531061 OSBPL9-025 nonsense_mediated_decay Homo_sapiens 0 342
ENST00000531828 OSBPL9-010 protein_coding Homo_sapiens 0 368
ENST00000532975 OSBPL9-017 protein_coding Homo_sapiens 0 676
ENST00000533884 OSBPL9-020 nonsense_mediated_decay Homo_sapiens 0 233
ENST00000534040 OSBPL9-018 nonsense_mediated_decay Homo_sapiens 0 320

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