C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tumor protein D52, pseudogene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000178097 Tpd52-ps-201 ENSMUSG00000094594 10090 - 8:79680266-79680824 pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverOvaryPlacentaTestisENSMUST00000178097
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Ovary Placenta Testis
ENSMUST00000178097 0.080±0.00 0.543±0.44 0.049±0.03 0.132±0.05 0.123±0.02 0.268±0.08 0.181±0.00 0.099±0.00 0.383±0.20 0.123±0.09 0.113±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YN CIL_0008YN_0002 VISTA 8:79537628-80138676
CIL_0006B8 CIL_0006B8_0002 CGP 8:79639618-79711740

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000379096 TPD52-002 protein_coding Homo_sapiens 0 494
ENST00000518937 TPD52-001 protein_coding Homo_sapiens 0 342
ENST00000521241 TPD52-021 nonsense_mediated_decay Homo_sapiens 0 222

Loading