C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: troponin T2, cardiac
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000178204 Tnnt2-204 ENSMUSG00000026414 10090 + 1:135836386-135852260 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeKidneyLungOvaryTestisENSMUST00000178204
Transcript ID Adipose Kidney Lung Ovary Testis
ENSMUST00000178204 1.217±0.00 0.232±0.08 12.375±0.74 0.771±0.35 1.572±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005200 IDA structural constituent of cytoskeleton
GO:0005737 IDA cytoplasm
GO:0005861 IDA troponin complex
GO:0006936 IDA muscle contraction
GO:0006937 IEA regulation of muscle contraction
GO:0007507 IMP heart development
GO:0008016 IMP regulation of heart contraction
GO:0030016 IDA myofibril
GO:0030017 IDA sarcomere
GO:0045214 IMP sarcomere organization
GO:0055009 IMP atrial cardiac muscle tissue morphogenesis
GO:0055010 IMP ventricular cardiac muscle tissue morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000236918 TNNT2-201 protein_coding Homo_sapiens 0 902
ENST00000360372 TNNT2-202 protein_coding Homo_sapiens 0 658
ENST00000367315 TNNT2-203 protein_coding Homo_sapiens 0 881
ENST00000367317 TNNT2-204 protein_coding Homo_sapiens 0 909
ENST00000367318 TNNT2-005 protein_coding Homo_sapiens 0 896
ENST00000367320 TNNT2-003 protein_coding Homo_sapiens 0 652
ENST00000367322 TNNT2-001 protein_coding Homo_sapiens 0 937
ENST00000412633 TNNT2-012 protein_coding Homo_sapiens 1.00053e-42 176
ENST00000421663 TNNT2-205 protein_coding Homo_sapiens 0 937
ENST00000422165 TNNT2-014 protein_coding Homo_sapiens 0 239
ENST00000438742 TNNT2-002 protein_coding Homo_sapiens 0 832
ENST00000455702 TNNT2-010 protein_coding Homo_sapiens 0 496
ENST00000458432 TNNT2-206 protein_coding Homo_sapiens 0 990
ENST00000466570 TNNT2-006 processed_transcript Homo_sapiens 0 499
ENST00000491504 TNNT2-004 retained_intron Homo_sapiens 0 863
ENST00000503459 TNNT2-022 retained_intron Homo_sapiens 0 375
ENST00000509001 TNNT2-008 protein_coding Homo_sapiens 0 881
ENST00000515042 TNNT2-019 retained_intron Homo_sapiens 0 737

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