C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: troponin T type 2 (cardiac)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000236918 TNNT2-201 ENSG00000118194 9606 - 1:201359009-201373254 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainMuscleENST00000236918
Transcript ID Brain Muscle
ENST00000236918 9.229±0.00 0.910±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IDA actin binding
GO:0005200 IEA structural constituent of cytoskeleton
GO:0005523 IDA tropomyosin binding
GO:0005737 IEA cytoplasm
GO:0005829 TAS cytosol
GO:0005861 IEA:IDA troponin complex
GO:0005865 IDA striated muscle thin filament
GO:0006200 IDA ATP catabolic process
GO:0006936 IEA muscle contraction
GO:0006937 IEA regulation of muscle contraction
GO:0007507 IEA heart development
GO:0008016 IMP regulation of heart contraction
GO:0016887 IDA ATPase activity
GO:0030016 IEA myofibril
GO:0030017 TAS sarcomere
GO:0030049 IDA muscle filament sliding
GO:0030172 IPI troponin C binding
GO:0031013 IPI troponin I binding
GO:0032780 IDA negative regulation of ATPase activity
GO:0032781 IDA positive regulation of ATPase activity
GO:0045214 IEA sarcomere organization
GO:0051592 IDA response to calcium ion
GO:0055009 IEA atrial cardiac muscle tissue morphogenesis
GO:0055010 IMP ventricular cardiac muscle tissue morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000112087 Tnnt2-001 protein_coding Mus_musculus 0 976
ENSMUST00000178854 Tnnt2-205 protein_coding Mus_musculus 0 965
ENSMUST00000189732 Tnnt2-003 protein_coding Mus_musculus 0 965
ENSMUST00000112086 Tnnt2-203 protein_coding Mus_musculus 0 959
ENSMUST00000112085 Tnnt2-202 protein_coding Mus_musculus 0 942
ENSMUST00000027671 Tnnt2-201 protein_coding Mus_musculus 0 942
ENSMUST00000189355 Tnnt2-002 protein_coding Mus_musculus 0 942
ENSMUST00000178204 Tnnt2-204 protein_coding Mus_musculus 0 902
ENSMUST00000179863 Tnnt2-206 protein_coding Mus_musculus 0 902
ENSMUST00000188028 Tnnt2-004 protein_coding Mus_musculus 0 902
ENSMUST00000189826 Tnnt2-008 protein_coding Mus_musculus 0 555
ENSMUST00000190451 Tnnt2-009 protein_coding Mus_musculus 0 224
ENSMUST00000178163 Tnnt1-201 protein_coding Mus_musculus 2e-39 167
ENSMUST00000166161 Tnnt1-004 protein_coding Mus_musculus 2e-39 167
ENSMUST00000163710 Tnnt1-003 protein_coding Mus_musculus 2e-39 167
ENSMUST00000108587 Tnnt1-002 protein_coding Mus_musculus 2e-39 167
ENSMUST00000071798 Tnnt1-001 protein_coding Mus_musculus 2e-39 167
ENSMUST00000163538 Tnnt1-010 protein_coding Mus_musculus 2e-30 137
ENSMUST00000166959 Tnnt1-006 protein_coding Mus_musculus 2e-30 137
ENSMUST00000166268 Tnnt1-011 protein_coding Mus_musculus 2e-30 137
ENSMUST00000163722 Tnnt1-005 protein_coding Mus_musculus 2e-24 117

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