C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 9830
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000178509 Gm9830-201 ENSMUSG00000094437 10090 + 9:44464243-44464602 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000178509
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000178509 0.708±0.21 0.596±0.02 0.654±0.00 2.066±1.11 0.845±0.25 1.223±0.85 0.437±0.08 0.674±0.34 1.261±0.58 0.540±0.23 0.282±0.15 3.159±0.36 0.077±0.00 1.620±0.77

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 IEA:ISS RNA binding
GO:0005634 ISS nucleus
GO:0005845 IEA:ISS mRNA cap binding complex
GO:0006370 ISS 7-methylguanosine mRNA capping
GO:0032259 IEA:ISS methylation
GO:0036031 ISS recruitment of mRNA capping enzyme to RNA polymerase II holoenzyme complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000304191 FAM103A1-001 protein_coding Homo_sapiens 0 357
ENST00000424552 RP11-671E7.1-001 processed_pseudogene Homo_sapiens 0 279
ENST00000444122 FAM103A2P-001 processed_pseudogene Homo_sapiens 0 361
ENST00000448432 RP11-453O22.1-001 processed_pseudogene Homo_sapiens 0 263
ENST00000510873 C15orf40-005 protein_coding Homo_sapiens 3e-18 95
ENST00000538348 C15orf40-006 protein_coding Homo_sapiens 1e-39 167

Loading